Survival-associated eQTLs across different cancer types
We identified 22,212 eQTLs associated with patient overall survival across different cancer types at FDR < 0.05.
Cancer type
|
SNP ID
|
SNP position (hg19)
|
Alleles (A/a)
|
log-rank test p-value
|
Sample size
|
Median survival time AA
|
Median survival time Aa
|
Median survival time aa
|
|
---|---|---|---|---|---|---|---|---|---|
KIRP | rs57771499 | chr10:75605492 | T/C | 2.22E-6 | 213 | 15.1 | 18.72 | 5.57 | KM Plot |
KIRP | rs5791027 | chr11:35028805 | T/TTA | 0 | 209 | 16.43 | 13.97 | 6.7 | KM Plot |
KIRP | rs57916339 | chr16:4530528 | T/C | 3.38E-6 | 214 | 16.45 | 12.63 | 10.83 | KM Plot |
KIRP | rs57947795 | chr1:89559811 | AAC/A | 5.25E-6 | 207 | 15.65 | 19.92 | 9.77 | KM Plot |
KIRP | rs58051625 | chr3:50278717 | G/C | 0.000101 | 214 | 15.75 | 19.5 | 7.13 | KM Plot |
KIRP | rs58063248 | chr5:79940605 | T/C | 0.000105 | 214 | 18.65 | 14.83 | 9.77 | KM Plot |
KIRP | rs58118007 | chr10:74953040 | T/A | 6.41E-12 | 212 | 16.73 | 11.3 | 5.6 | KM Plot |
KIRP | rs58135052 | chr19:16534910 | G/A | 5.63E-11 | 210 | 16.47 | 13.03 | 8.08 | KM Plot |
KIRP | rs58136164 | chr1:63808330 | C/CT | 2.64E-6 | 212 | 14.83 | 18.95 | 8.03 | KM Plot |
KIRP | rs58190241 | chr16:47708558 | G/A | 2.03E-5 | 213 | 17.2 | 12.9 | 11.93 | KM Plot |
KIRP | rs58355034 | chr20:37226398 | C/T | 4.44E-16 | 212 | 6.7 | 24.9 | 15.88 | KM Plot |
KIRP | rs58410260 | chr1:89550238 | T/C | 7.64E-5 | 208 | 16.43 | 19.53 | 9.38 | KM Plot |
KIRP | rs58490646 | chr5:79940534 | A/G | 0.000105 | 214 | 18.65 | 14.83 | 9.77 | KM Plot |
KIRP | rs58616630 | chr6:27474715 | A/G | 1.98E-7 | 214 | 16.45 | 13.6 | 9.77 | KM Plot |
KIRP | rs58668900 | chr14:74293008 | G/A | 0.000331 | 213 | 16.97 | 18.23 | 6.57 | KM Plot |